Machine Learning to Identify Critical Biomarker Profiles in New SARS-CoV-2 Variants

MICROORGANISMS(2024)

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摘要
The global dissemination of SARS-CoV-2 resulted in the emergence of several variants, including Alpha, Alpha + E484K, Beta, and Omicron. Our research integrated the study of eukaryotic translation factors and fundamental components in general protein synthesis with the analysis of SARS-CoV-2 variants and vaccination status. Utilizing statistical methods, we successfully differentiated between variants in infected individuals and, to a lesser extent, between vaccinated and non-vaccinated infected individuals, relying on the expression profiles of translation factors. Additionally, our investigation identified common causal relationships among the translation factors, shedding light on the interplay between SARS-CoV-2 variants and the host's translation machinery.
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关键词
SARS-CoV-2,vaccination state,variants,Alpha,Alpha+E484K,Beta,Omicron,z-scores,PC algorithm,precision,recall,F1 score,machine learning,Restricted Boltzmann Machine neural network
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