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Circulating microbiome DNA as biomarkers for early diagnosis and recurrence of lung cancer

Haiming Chen, Yi Ma, Juqing Xu, Wenxiang Wang, Hao Lu, Cheng Quan,Fan Yang, Yiming Lu, Hao Wu, Mantang Qiu

CELL REPORTS MEDICINE(2024)

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Abstract
Lung cancer mortality is exacerbated by late-stage diagnosis. Emerging evidence indicates the potential clinical significance of distinct microbial signatures as diagnostic and prognostic biomarkers across various cancers. However, circulating microbiome DNA (cmDNA) profiles are underexplored in lung cancer (LC). Here, whole-genome sequencing is performed on plasma of LC patients and healthy controls (HCs). Differentially enriched microbial species are identified between LC and HC. A diagnostic model is developed, which has a high sensitivity of 87.7% and achieves an AUC of 93.2% in the independent validation dataset. Crucially, this model demonstrates the capability to detect early-stage LC, achieving a sensitivity of 86.5% for stage I and 87.1% for tumors <1 cm. In addition, we construct a cmDNA model for recurrence, which precisely predicts LC recurrence after surgery. Overall, this study highlights the significant alterations of cmDNA profiles in LC, indicating its potential as biomarkers for early diagnosis and recurrence.
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Key words
early detection,recurrence,circulating microbiome DNA,biomarker
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