The genomic landscape of CYP2D6 variation in the Indian population

Ambily Sivadas, Surabhi Rathore, S. Sahana, Bani Jolly, Rahul C. Bhoyar, Abhinav Jain, Disha Sharma, Mohamed Imran, Vigneshwar Senthilvel, Mohit Kumar Divakar, Anushree Mishra,Sridhar Sivasubbu,Vinod Scaria

PHARMACOGENOMICS(2024)

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摘要
Aim: The CYP2D6 gene is highly polymorphic, causing large interindividual variability in the metabolism of several clinically important drugs. Materials & methods: The authors investigated the diversity and distribution of CYP2D6 alleles in Indians using whole genome sequences (N = 1518). Functional consequences were assessed using pathogenicity scores and molecular dynamics simulations. Results: The analysis revealed population-specific CYP2D6 alleles (*86, *7, *111, *112, *113, *99) and remarkable differences in variant and phenotype frequencies with global populations. The authors observed that one in three Indians could benefit from a dose alteration for psychiatric drugs with accurate CYP2D6 phenotyping. Molecular dynamics simulations revealed large conformational fluctuations, confirming the predicted reduced function of *86 and *113 alleles. Conclusion: The findings emphasize the utility of comprehensive CYP2D6 profiling for aiding precision public health.
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关键词
cytochrome P450,drug metabolism,genomics,Indian population,molecular dynamics simulation,personalized medicine,pharmacogenomics,pharmacology,polymorphism
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