The Transcriptional Regulatory Mechanisms Exploration of Jujube Biological Traits through Multi-Omics Analysis

Shulin Zhang, Zhuo Chen, Luying Feng, Zhaokun Zhi, Yiteng Liu, Mengmeng Zhang, Huafeng Yue,Gao-Pu Zhu, Fuling Gao

FORESTS(2024)

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Abstract
Jujube (Ziziphus jujuba Mill.) stands as a pivotal fruit tree with significant economic, ecological, and social value. Recent years have witnessed remarkable strides in multi-omics-based biological research on jujube. This review began by summarizing advancements in jujube genomics. Subsequently, we provided a comprehensive overview of the integrated application of genomics, transcriptomics, and metabolomics to explore pivotal genes governing jujube domestication traits, quality attributes (including sugar synthesis, terpenoids, and flavonoids), and responses to abiotic stress and discussed the transcriptional regulatory mechanisms underlying these traits. Furthermore, challenges in multi-omics research on jujube biological traits were outlined, and we proposed the integration of resources such as pan-genomics and sRNAome to unearth key molecules and regulatory networks influencing diverse biological traits. Incorporating these molecules into practical breeding strategies, including gene editing, transgenic approaches, and progressive breeding, holds the potential for achieving molecular-design breeding and efficient genetic enhancement of jujube.
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Key words
Ziziphus jujuba Mill.,fruit,genome,transcript factor,transcriptome
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