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A High-Performance Computational Workflow to Accelerate GATK SNP Detection Across a 25-Genome Dataset

Yong Zhou,Nagarajan Kathiresan,Zhichao Yu,Luis F. Rivera, Yujian Yang,Manjula Thimma, Keerthana Manickam,Dmytro Chebotarov,Ramil Mauleon,Kapeel Chougule,Sharon Wei,Tingting Gao,Carl D. Green,Andrea Zuccolo,Weibo Xie,Doreen Ware,Jianwei Zhang,Kenneth L. McNally,Rod A. Wing

BMC BIOLOGY（2024）

Cited 2|Views63
Key words
High-performance computing (HPC),Genome Analysis Toolkit (GATK),Single-nucleotide polymorphisms (SNPs),Rice,Sorghum,Maize,Soybean
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