SIMPL - An Application for Cell and Microbe Tracking Using Machine Learning.
2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)(2023)
Abstract
In the ever-evolving landscape of research and clinical practices, the role of microscope-based image capture and analysis cannot be overstated. While current methodologies for micrograph analysis offer substantial power, there exist critical gaps, particularly in user functionality and reproducibility. To bridge these gaps, we introduce the Smart Imaging of Micrographs Process and Labeling (SIMPL) system as an open-source, semi-automated framework designed for image and video capture, analysis, and particle tracking. SIMPL aims to meet the demands of high-throughput applications, especially for reproducible microbe tracking.
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Key words
autofocus,microscope imaging,microbe tracking,micrograph analysis
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