Simplicispira sedimenti sp. nov., isolated from a sediment of drainage ditch in winery
Antonie van Leeuwenhoek(2024)
Abstract
A Gram-stain-negative, motile (by single polar flagellum) and rod-shaped bacterium, designated W1-6 T , was isolated from a sediment of drainage ditch in winery in Guiyang, south-western China. Strain W1-6 T showed the highest 16S rRNA gene sequence similarities with the type strain of Acidovorax wautersii (98.1%) and Simplicispira lacusdiani (97.9%). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain W1-6 T was placed adjacent to the members of the genus Simplicispira and formed a separat subclade. Cells showed oxidase and catalase negative reactions. The only respiratory quinone detected was ubiquinone-8 (Q-8). Summed feature 3 (C 16:1 ω 7 c and/or C 16:1 ω 6 c ), C 16:0 and summed feature 8 (C 18:1 ω 7 c and/or C 18:1 ω 6 c ) were predominant cellular fatty acids (> 10%) of strain W1-6 T . Diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and five unidentified phospholipids were found in the polar lipid extraction. The genomic DNA G + C content was 65.6%. Strain W1-6 T shared the highest digital DNA-DNA hybridization [dDDH, (27.6%)] and average nucleotide identity [ANI (84.3%)] values with the type strain of S. lacusdiani. The dDDH and ANI values were below the cutoff level (dDDH 70%; ANI 95–96%) for species delineation. The polyphasic characteristics indicated that the strain W1-6 T represents a novel species of the genus Simplicispira , for which the name Simplicispira sedimenti sp. nov. is proposed. The type strain is W1-6 T (= CGMCC 1.16274 T = NBRC 115624 T ).
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Key words
Simplicispira sedimenti sp. nov.,Polyphasic taxonomy,Winery
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