NanoPyx: super-fast bioimage analysis powered by adaptive machine learning

Research Square (Research Square)(2023)

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Abstract
Abstract The expanding scale and complexity of microscopy image datasets require accelerated analytical workflows. NanoPyx meets this need through an adaptive framework enhanced for high-speed bioimage analysis. At the core of NanoPyx, the Liquid Engine dynamically generates optimised CPU and GPU-based code variations, learning and predicting the fastest based on input data and hardware. This data-driven optimisation achieves over 10x faster processing, becoming broadly relevant to reactive microscopy and computing fields requiring efficiency.
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super-fast
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