Mutations in OsRZF1, encoding a zinc-finger protein, causes reduced magnesium uptake in roots and translocation to shoots in rice

Abstract Magnesium (Mg) homeostasis is critical for maintaining many biological processes, but little information is available to comprehend the molecular mechanisms regulating Mg concentration in rice (Oryza sativa). To make up for the lack of information, we aimed to identify mutants defective in Mg homeostasis through a forward genetic approach. As a result of the screening of about 3,000 M2 seedlings mutated by ion-beam irradiation, we found a rice mutant that showed reduced Mg content in leaves and slightly increased Mg content in roots. Radiotracer 28 Mg experiments showed that this mutant, named low magnesium content 1 (LMGC1), has decreased Mg 2+ influx in the root and Mg 2+ translocation from root to shoot. The MutMap method identified 7.4 kbp deletion in the LMGC1 genome leading to a loss of two genes. Genome editing using CRISPR-Cas9 further revealed that one of the two lost genes, a gene belonging to RanBP2-type zinc finger family, was the causal gene of the low-Mg phenotype. Considering this gene, named OsRZF1, has never been reported to be involved in ion transport, the phenotype of LMGC1 would be associated with a novel mechanism of Mg homeostasis in plants.