mStrain: strain-level identification of Yersinia pestis using metagenomic data.

Xiuwei Qian,Yarong Wu, Xiujuan Zuo, Xin Peng,Yan Guo, Ruifu Yang,Xianglilan Zhang,Yujun Cui

Bioinformatics advances（2023）

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Abstract

The code for running mStrain, the test dataset, and instructions for running the code can be found at the following GitHub repository: https://github.com/xwqian1123/mStrain.

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