Assessment of bacterial and viral gut communities in healthy and tumoral colorectal tissue using RNA and DNA deep sequencing.

Ainhoa Garcia-Serrano,Dhananjay Mukhedkar,Emilie Hultin,Ulla Rudsander,Yvonne Wettergren,Agustín Enrique Ure,Joakim Dillner,Laila Sara Arroyo-Mühr

Cancer medicine（2023）

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摘要

Joint assessment of the metagenome (DNA) and the metatranscriptome (RNA) at the species level provided a huge coverage for both bacteria and virus and identifies differential specific bacterial species as tumor associated.

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colorectal cancer,deep‐sequencing,gut microbiome

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