Metabolic Functional Profiles of Microbial Communities in Methane Production Systems Treating Winery Wastewater

This study investigated the impact of process configuration and conditions on microbial communities and metabolic pathways in the anaerobic digestion of winery effluents. Four system configurations were analyzed for taxonomic and functional profiles using 16S rRNA gene sequencing and Tax4Fun2. Sporolactobacillus , Prevotella , and Acetobacter dominated (> 70%) in the acidogenic reactor with 5277 conserved functions across configurations. In the methanogenic reactor, methane production relied on Methanosaeta in the single-stage configuration (13%) and five archaea genera in the two-stage configuration (18%). Thermophilic conditions favored syntrophic acetate oxidation and hydrogenotrophic methanogenesis by Methanothermobacter (65%), significantly changing due to temperature. The two-stage configuration exhibited 3.0 times higher functional redundancy than the single-stage configuration. Mesophilic conditions displayed 2.5 times greater functional redundancy than thermophilic conditions. High organic loading rate and short hydraulic retention time reduced functional redundancy by 1.5 times. Assessing microbial functionality beyond their composition is crucial to understand stability and performance of anaerobic digestion systems.