Coarse-Grained Simulations of Dna and Rna Systems with Oxdna and Oxrna Models: Tutorial.
2023 Winter Simulation Conference (WSC)（2023）
Key words
Nucleic Acid,Simulated DNA,Coarse-grained Model,DNA Nanotechnology,Molecular Dynamics,DNA Strand,Random Generation,Order Parameter,Production Run,Monte Carlo Algorithm,Computer Cluster,Simulation Code,Strand Displacement,Jupyter Notebook,Pseudoknot,Topology Files,Umbrella Sampling,Optional Parameters,DNA Origami,Neighbor List,Group Of Nucleotide,Weighted Histogram Analysis Method,Properties Of RNA,Unbiased Simulations,Large-scale Conformational Changes,Input Files,High-performance Computing,Running,Simulation Parameters,Code Version
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