RNA-Guided DNA Transposition in Corynebacterium glutamicum and Bacillus subtilis .

Siqi Yang,Jiao Zhu, Xiaojie Zhou,Jiao Zhang,Qi Li, Furong Bian, Jidong Zhu, Ting Yan,Xiaoyu Wang,Ying Zhang,Junjie Yang,Yu Jiang,Sheng Yang

ACS synthetic biology(2023)

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摘要
Recently discovered CRISPR-associated transposases (CASTs) have been implemented as useful multiplexed genome editing tools, albeit only in a small group of bacteria. We demonstrated that the type I-F CAST from could induce RNA-guided transposition in and with efficiencies of 0.00018% and 0.027%, respectively. Lowering the culturing temperature to 16 °C in rich media increased the insertion efficiency to 3.64% in . By adding a positive selection against spectinomycin in the cargo DNA, up to 9 kb of the DNA fragment could be integrated at the target site with a 13.4% efficiency in , which was difficult using the conventional approach. The successful implementation of CAST in these two academically important and industrial-relevant Firmicutes shows its great potential in a wide variety of bacteria and could be further optimized for multiplexed genome editing.
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关键词
CRISPR-associated transposases (CASTs), Bacillussubtilis, Corynebacterium glutamicum, large fragment insertion
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