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Discovery of genome-wide genetic variations and development of first set of InDel markers for genetics research in cashew

Siddanna Savadi, J.D. Adiga,B.M. Muralidhara,Pramod Prasad, K. Manjunatha, K. Ashwitha,Gokul Mohan, Manju Manuel, K. Manoj

Scientia Horticulturae（2023）

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Abstract
•For the first time, genome wide genetic variants (SNPs &InDels) were identified and characterized in cashew by genome resequencing.•About 97% reads generated were mapped on to the draft genome and a total of 420560 SNPs and 26987 InDels were identified.•Developed 88 novel InDel markers for the first time for cashew and many were cross species transferable.
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Key words
Resequencing, Variant, InDel, Inter -specific, Anacardium, Transferability
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