Elevated nuclear TDP-43 induces constitutive exon skipping.

Rogger P Carmen-Orozco,William Tsao, Yingzhi Ye,Irika R Sinha,Koping Chang, Vickie Trinh, William Chung, Kyra Bowden,Juan C Troncoso, Seth Blackshaw, Lindsey R Hayes,Shuying Sun, Philip C Wong, Jonathan P Ling

bioRxiv : the preprint server for biology(2023)

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Abstract
Cytoplasmic inclusions and loss of nuclear TDP-43 are key pathological features found in several neurodegenerative disorders, suggesting both gain- and loss-of-function mechanisms of disease. To study gain-of-function, TDP-43 overexpression has been used to generate in vitro and in vivo model systems. Our study shows that excessive levels of nuclear TDP-43 protein lead to constitutive exon skipping that is largely species-specific. Furthermore, while aberrant exon skipping is detected in some human brains, it is not correlated with disease, unlike the incorporation of cryptic exons that occurs after loss of TDP-43. Our findings emphasize the need for caution in interpreting TDP-43 overexpression data, and stress the importance of controlling for exon skipping when generating models of TDP-43 proteinopathy. Understanding the subtle aspects of TDP-43 toxicity within different subcellular locations is essential for the development of therapies targeting neurodegenerative disease.
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