Reducing Boolean networks with backward equivalence.

BMC Bioinform.(2023)

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摘要
BBE complements existing reduction methods, preserving properties that other reduction methods fail to reproduce, and vice versa. BBE drops all and only the dynamics, including attractors, originating from states where BBE-equivalent variables have been initialized with different activation values The remaining part of the dynamics is preserved exactly, including the length of the preserved attractors, and their reachability from given initial conditions, without adding any spurious behaviours. Given that BBE is a model-to-model reduction technique, it can be combined with further reduction methods for BNs.
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关键词
Boolean network,Model reduction,State-space generation,Attractors analysis,Partition refinement
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