Generating high quality reference genomes from field collected specimens by optimizing preservation
bioRxiv (Cold Spring Harbor Laboratory)(2023)
Abstract
Sample preservation challenges efforts to generate high-quality reference genomes or pangenomes for all 2 million+ plant and animal species. Here we show 95% ethanol protects against degradation for fish blood (22°C, ≤6 weeks) and plant tissue (4°C, ≤3 weeks). Using Nanopore, we assemble high quality reference genomes from three fish and two plant species (contig N50: 6.5-13.8Mb; BUSCO completeness: 94.4-99.2%; QV: 43.8 for M. esculenta ).
### Competing Interest Statement
The authors have declared no competing interest.
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Key words
high quality reference,specimens,preservation
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