Low diversity and microdiversity of comammox bacteria in wastewater systems suggest specific adaptations within the Ca. Nitrospira nitrosa cluster

Irmarie Cotto,Katherine J Vilardi,Linxuan Huo,Emily C Fogarty,Wendell Khunjar,Christopher Wilson,Haydee De Clippeleir,Kevin Gilmore,Erika Bailey,Sebastian Lücker,Ameet J Pinto

Water Research（2023）

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摘要

•AOB presented high diversity while Nitrospira-NOB presented high microdiversity.•A single species is the dominant comammox bacteria in multiple systems.•Each system harbored a different strain of Ca. Nitrospira nitrosa.•Hybrid and re-assembly approaches struggle with microdiverse genome reconstruction.

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关键词

Comammox bacteria,Nitrification,Wastewater,Microdiversity,Amplicon sequencing,Metagenomics

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