Simulating structural plasticity of the brain more scalable than expected

Journal of Parallel and Distributed Computing(2023)

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摘要
Structural plasticity of the brain describes the creation of new and the deletion of old synapses over time. Rinke et al. (JPDC 2018) introduced a scalable algorithm that simulates structural plasticity for up to one billion neurons on current hardware using a variant of the Barnes–Hut algorithm. They demonstrate good scalability and prove a runtime complexity of O(nlog2⁡n). In this comment paper, we show that with careful consideration of the algorithm and a rigorous proof, the theoretical runtime can even be classified as O(nlog⁡n).
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关键词
Brain,Connectome,Simulation,Barnes–Hut,Large-scale
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