A Systematic Approach to Configuring MetaMap for Optimal Performance.

Xia Jing, Akash Indani,Nina Hubig,Hua Min, Yang Gong,James J Cimino,Dean F Sittig,Lior Rennert,David Robinson,Paul Biondich,Adam Wright,Christian Nøhr,Timothy Law,Arild Faxvaag,Ronald Gimbel

Methods of information in medicine（2022）

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Abstract

We demonstrated a systematic approach that provides objective and accurate evidence guiding MetaMap configurations for optimizing performance. Combining objective evidence and the current practice of using principles, experience, and intuitions outperforms a single strategy in MetaMap configurations. Our methodology, reference codes, measurements, results, and workflow are valuable references for optimizing and configuring MetaMap.

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Key words

MetaMap,natural language processing,clinical decision support system,configuration and optimization,performance

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