popsicleR: A R Package for Pre-processing and Quality Control Analysis of Single Cell RNA-seq Data

Francesco Grandi,Jimmy Caroli,Oriana Romano,Matteo Marchionni,Mattia Forcato,Silvio Bicciato

Journal of Molecular Biology（2022）

引用 3|浏览9

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摘要

popsicleR workflow. The package is composed of seven main functions to perform exploration of quality-control metrics, filtering of low-quality cells, identification of cell doublets, data normalization, removal of technical and biological biases, cell clustering, and cell annotation.

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关键词

single cell RNA-sequencing,data analysis,bioinformatics,R language,software tools

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