Constructing mRNA, miRNA, circRNA and lncRNA regulatory network by Analysis of microarray data in breast cancer

Bita Hassani,Hasan Mollanoori,Farkhondeh Pouresmaeili,Yazdan Asgari,Soudeh Ghafouri-Fard

Gene Reports（2022）

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Abstract

•The present study listed several ncRNAs, which could bind to miRNA to modulate breast cancer development.•Regulatory networks were designed for both lncRNA-miRNA-mRNA and circRNA-miRNA-mRNA.•These data could develop new field of research and therapeutic options for BC patients.

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Key words

3′-UTR,BC,ncRNA,miRNA,lncRNA,circRNA,ceRNA,GEO,FOXO3,RHOA,EZH2,KIT,HSP90B1,NCOA3,RAC1,IGF1,CAV1,CXCR4,CCNB1,ITGB1,NORAD,MALAT1,TUG1,ZFAS1,OPI5-AS1,PPI network,RMA,DEG,DEmiR,DEcRNA,DEL,logFC,MRE,CSCD,STRING,MCODE,DO,GO,CC,MF,BP,KEGG pathways,GEPIA,TCGA,GTEx,RBP,ORF,OS,DFS,PDCD4,STAT6,TNBC,ER,RNAi,ZEB2,FTX,XIST,HOTAIR,BCAR4,NKILA,ANCR,PTEN,PI3-K/Akt

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