SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data.

Taylor Griswold,Curtis Kapsak,Jessica C Chen,Henk C den Bakker, Grant Williams, Alyssa Kelley,Eshaw Vidyaprakash,Lee S Katz

Journal of open source software（2021）

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摘要

Laboratories that run Whole Genome Sequencing (WGS) produce a tremendous amount of data, up to 10 gigabytes for some common instruments. There is a need to standardize the quality assurance and quality control process (QA/QC). Therefore we have created SneakerNet to automate the QA/QC for WGS.

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