Development and evaluation of an RT-qPCR for the identification of the SARS-CoV-2 Omicron variant.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology(2022)

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Abstract
This assay detects SARS-CoV-2 Spike indel_211–214.The envelope gene is used as internal control.The indel_211–214 target demonstrated a 95% lower limit of detection of 1.3 copies/µL eluate.100% positive and negative percent agreement was observed using Omicron and delta samples genotyped by whole genome sequencing.
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