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Differential transcriptome analysis of genes associated with the rhizome growth and sesquiterpene biosynthesis in Atractylodes macrocephala

Qingyan Ruan,Jingyi Wang,Chengyu Xiao,Yinkai Yang,Enhui Luo,Miaomiao Sheng,Ying Zheng,Wei Zhou,Guoyin Kai,Xiaolong Hao

Industrial Crops and Products（2021）

Cited 9|Views8
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Abstract
•Atractylodes III mainly accumulated in the underground parts of Atractylodes macrocephala.•Transcriptome sequencing of five different tissues of A. macrocephala were performed.•EF-1α was the best reference gene for tissue expression pattern analysis in A. macrocephala.•14 transcription factors predominantly expressed in the rhizomes of A. macrocephala.•AmFPPS was verified to catalyze the biosynthesis of sesquiterpene in A. macrocephala.
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AO-I,AO-II,AO-III,ACT,DMAPP,DEGs,EF-1α,FDR,FPP,FPPS,GAPDH,IPP,IDI,MVA,MEP,qRT-PCR,TCM,TF,TPM,TUB,UBQ,18S
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