Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia

Alicia Arnott,Jenny Draper,Rebecca J. Rockett,Connie Lam,Rosemarie Sadsad,Mailie Gall,Elena Martinez,Roy Byun,Jennie Musto,Ben Marais,Sharon C.-A. Chen,Jen Kok,Dominic E. Dwyer,Vitali Sintchenko

BMC Research Notes（2021）

引用 4|浏览5

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摘要

Objective To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters. Results This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interventions on the emergence, spread and eventual elimination of clusters and distilled genomic data into clear information to inform public health action.

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关键词

SARS-CoV-2,Genomic epidemiology,Bioinformatics,Whole genome sequencing,Australia

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