Epidemiological Significance Of Sars-Cov-2 Rna Dynamic In Naso-Pharyngeal Swabs

MICROORGANISMS(2021)

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摘要
From 16 March to 15 December 2020, 132,357 naso-pharyngeal/oropharyngeal swabs were collected in the province of Teramo, Abruzzo Region, Italy, and tested for the presence of SARS-CoV-2 genomic RNA by a commercially available molecular assay. A total of 12,880 swabs resulted positive. For 8212 positive patients (4.150 women and 4.062 men) the median age was statistically different between women (median: 49.55 +/- 23.9 of SD) and men (median: 48.35 +/- 23.5 of SD) while no differences were found in the comparison between the cycle threshold for the N protein-encoding gene (C-T N) median values and gender. Differences were observed in the C-T N gene median values of swabs collected from March to September as well as in the pairwise comparison between September and October and between November and December. The C-T N gene median values observed in specific periods characterizing the SARS-CoV-2 epidemic in 2020 were also compared with the incidence of COVID-19 cases; a strong inverse correlation was highlighted (Pearson correlation coefficient = -0.978). Our findings confirm the usefulness of the C-T N values as an indirect detection parameter to monitor viral loads in the population.
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关键词
SARS-CoV-2, cycle threshold, Abruzzo, COVID-19, naso-pharyngeal swab, viral circulation
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