The Classification of Short Scientific Texts Using Pretrained BERT Model

Automated text classification is a natural language processing (NLP) technology that could significantly facilitate scientific literature selection. A specific topical dataset of 630 article abstracts was obtained from the PubMed database. We proposed 27 parametrized options of PubMedBERT model and 4 ensemble models to solve a binary classification task on that dataset. Three hundred tests with resamples were performed in each classification approach. The best PubMedBERT model demonstrated F1-score = 0.857 while the best ensemble model reached F1score = 0.853. We concluded that the short scientific texts classification quality might be improved using the latest state-of-art approaches.