Watching a double strand break repair polymerase insert a pro-mutagenic oxidized nucleotide

NATURE COMMUNICATIONS(2021)

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摘要
Oxidized dGTP (8-oxo-7,8-dihydro-2´-deoxyguanosine triphosphate, 8-oxodGTP) insertion by DNA polymerases strongly promotes cancer and human disease. How DNA polymerases discriminate against oxidized and undamaged nucleotides, especially in error-prone double strand break (DSB) repair, is poorly understood. High-resolution time-lapse X-ray crystallography snapshots of DSB repair polymerase μ undergoing DNA synthesis reveal that a third active site metal promotes insertion of oxidized and undamaged dGTP in the canonical anti -conformation opposite template cytosine. The product metal bridged O8 with product oxygens, and was not observed in the syn -conformation opposite template adenine (A t ). Rotation of A t into the syn -conformation enabled undamaged dGTP misinsertion. Exploiting metal and substrate dynamics in a rigid active site allows 8-oxodGTP to circumvent polymerase fidelity safeguards to promote pro-mutagenic double strand break repair.
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关键词
Cancer,Enzyme mechanisms,X-ray crystallography,Science,Humanities and Social Sciences,multidisciplinary
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