The complete chloroplast genome of Lindera pulcherrima var. hemsleyana (Lauraceae)

MITOCHONDRIAL DNA PART B-RESOURCES(2020)

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Abstract
Lindera pulcherrimavar.hemsleyanais an evergreen tree of the genusLinderawith important medicinal value. The complete chloroplast genome ofL. pulcherrimavar.hemsleyanais 152,710 bp in length, containing a LSC region of 93,751 bp, a SSC region of 18,813 bp, and a pair of inverted repeats (IRA and IRB) of 20,073 bp each. The genome encoded 128 genes, including 83 protein-coding genes, 8 ribosomal RNA genes, 36 transfer RNA genes, and one pseudogene (ycf1). Most of these genes occurred in a single copy, whereas 15 genes occurred in double copies, including all rRNA, 6 tRNA, and 5 protein-coding genes. The GC content of the whole genome, LSC, SSC, and IR regions is 39.2%, 38.0%, 33.9%, and 44.4%, respectively. A total of 90 SSRs were discovered, the numbers of mono-, di-, tri-, tetra-, penta-, and hexa-nucleotides SSRs were 66, 10, 4, 8, 1, and 1, respectively. Phylogenetic analysis of cp genomes from 24 species of Lauraceae revealed that cp genomes ofL. pulcherrimavar.hemsleyana,L. pulcherrimavar.attenuata, andL. pulcherrimaformed a monophyletic clade with 100% bootstrap value.
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Key words
Lindera pulcherrimavar,hemsleyana,chloroplast genome,phylogenetic analysis,Lauraceae
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