Ktedonosporobacter Rubrisoli Gen. Nov., Sp. Nov., A Novel Representative Of The Class Ktedonobacteria, Isolated From Red Soil, And Proposal Of Ktedonosporobacteraceae Fam. Nov
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY(2020)
Abstract
A novel filamentous, spore-forming, Gram-stain-positive bacterium, designated SCAWS-G2(T), was isolated from red soil in Jiangxi Province, PR China. The strain grew at 25-45 degrees C and at pH 4.0-7.0, and was able to tolerate up to 50 mM Zn2+. The complete genome of strain SCAWS-G2(T) was a circular chromosome of similar to 11.34 Mb, which contained four 16S rRNA genes with three sequence types (0.4-0.8%differences). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SCAWS-G2(T) formed a distinct lineage within the order Ktedonobacterales, showing <89.2% sequence similarities to the recognized taxa of this order. The whole-genome based phylogenomic tree separated strain SCAWS-G2(T) from the recognized families within Ktedonobacterales. The genome-wide average nucleotide identity values between strain SCAWS-G2(T) and the related type strains were <68.2%. The strain can also be differentiated from the recognized families by a number of phenotypic characteristics. The polar lipids of SCAWS-G2(T) were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, seven unidentified glycolipids and one unidentified lipid. The peptidoglycan amino acids contained ornithine, glycine, glutamic acid and alanine, and the cell-wall sugars were mainly galactose and rhamnose. The major fatty acids were C-16:1 2-OH, C-16(:0) and iso-C-17:0. Based on all these data, we propose that strain SCAWS-G2(T) represents a novel genus and species, Ktedonosporobacter rubrisoli gen. nov., sp. nov., within the new family Ktedonosporobacteraceae fam. nov. of the order Ktedonobacterales. The type strain of Ktedonosporobacter rubrisoli is SCAWS-G2(T) (=CGMCC 1.16132(T) =DSM 105258(T)).
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Key words
Ktedoncsporobacter,polyphasic taxonomy,complete genome sequence,red soil,Ktedonosporobacteraceae
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