Identification of the relative timing of infectiousness and symptom onset for outbreak control

JOURNAL OF THEORETICAL BIOLOGY(2020)

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摘要
In an outbreak of an emerging disease the epidemiological characteristics of the pathogen may be largely unknown. A key determinant of ability to control the outbreak is the relative timing of infectiousness and symptom onset. We provide a method for identifying this relationship with high accuracy based on data from simulated household-stratified symptom-onset data. Further, this can be achieved with observations taken on only a few specific days, chosen optimally, within each household. The information provided by this method may inform decision making processes for outbreak response. An accurate and computationally-efficient heuristic for determining the optimal surveillance scheme is introduced. This heuristic provides a novel approach to optimal design for Bayesian model discrimination. (C) 2019 Elsevier Ltd. All rights reserved.
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关键词
Bayesian model discrimination,Epidemiology,Optimal experimental design,Random forests.
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