FASTGenomics: An analytical ecosystem for single-cell RNA sequencing data

Claus Scholz,Paweł Biernat,Matthias Becker,Kevin Baßler,Patrick Günther,Jenny Balfer,Henning Dickten, Lars Flöer,Kathrin Heikamp,Philipp Angerer,Matthias Heilig, Ralf Karle,Meike Köhler, Thomas Mazurkiewicz, Martin Mönnighoff, Christian Sauer, Albrecht Schick, Gerhard Schlemm, Roland Weigelt, Martin Winkler,Thomas Ulas,Fabian J. Theis, Stephan Huthmacher,Christina Kratsch,Joachim L. Schultze

bioRxiv(2018)

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摘要
Recent technological advances enable genomics of individual cells, the building blocks of all living organisms. Single cell data characteristics differ from those of bulk data, which led to a plethora of new analytical strategies. However, solutions are only useful for experts and currently, there are no widely accepted gold standards for single cell data analysis. To meet the requirements of analytical flexibility, ease of use and data security, we developed FASTGenomics (https://fastgenomics.org) as a powerful, efficient, versatile, robust, safe and intuitive analytical ecosystem for single-cell transcriptomics.
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关键词
single cell genomics,single cell RNA-sequencing,ecosystem,systems biology
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