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Multispectral tracing in densely labeled mouse brain with nTracer.

Douglas H Roossien,Benjamin V Sadis,Yan Yan,John M Webb, Lia Y Min,Aslan S Dizaji,Luke J Bogart,Cristina Mazuski,Robert S Huth, Johanna S Stecher,Sriakhila Akula,Fred Shen,Ye Li, Tingxin Xiao, Madeleine Vandenbrink,Jeff W Lichtman,Takao K Hensch,Erik D Herzog,Dawen Cai

BIOINFORMATICS（2019）

Cited 20|Views153
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Abstract
This note describes nTracer, an ImageJ plug-in for user-guided, semi-automated tracing of multispectral fluorescent tissue samples. This approach allows for rapid and accurate reconstruction of whole cell morphology of large neuronal populations in densely labeled brains.
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Key words
multispectral tracing,mouse brain,ntracer
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