Chrome Extension
WeChat Mini Program
Use on ChatGLM

Neutral Pyrrole Nitrogen Atom as a π- and Mixed n,π-Donor in Hydrogen Bonding.

JOURNAL OF ORGANIC CHEMISTRY(2019)

Cited 8|Views34
No score
Abstract
9-Dimethylaminobenzo[g]indoles 3-6 and 1-dimethylamino-8-(pyrrolyl-1)naphthalene 7 were examined as possible models for establishing the ability of the pyrrole nitrogen atom to participate in [NHN](+) hydrogen bonding as a proton acceptor. Indoles 3-5 (to a lesser extent 6) form rather stable tetrafluoroborates, with the proton mostly located on the NMe2 group but simultaneously engaged in the formation of a charged intramolecular [NHN](+) hydrogen bond (IHB) with the pyrrole N atom. The theoretically estimated energies of IHB in salts 3H(+)BF(4)(-)-6H(+)BF(4)(-) vary between 7.0-10.7 and 6.2-7.0 kcal mol(-1) in vapor and MeCN, respectively. The pyrrole N atom undergoes a perceptible pyramidalization but still remains involved in the 6 pi-electron aromatic system, suggesting that the hydrogen bonding in salts 3H(+)BF(4)(-)-6H(+)BF(4)(-) represents a previously unknown mixed NH center dot center dot center dot N(n,pi) interaction. Despite the favorable orientation of the N-H bond and the pyrrole ring in salt 7H(+)BF(4)(-), no signs of NH center dot center dot center dot N(n) bonding in it were noticed, and the existing interaction was classified as pure NH center dot center dot center dot N(pi). The results obtained may be useful in studies of secondary protein structures, especially those alpha-helix sections which contain tryptophan residues.
More
Translated text
Key words
hydrogen bonding,nitrogen
AI Read Science
Must-Reading Tree
Example
Generate MRT to find the research sequence of this paper
Chat Paper
Summary is being generated by the instructions you defined