Fast assembling of neuron fragments in serial 3D sections
Brain Informatics(2017)
Abstract
Reconstructing neurons from 3D image-stacks of serial sections of thick brain tissue is very time-consuming and often becomes a bottleneck in high-throughput brain mapping projects. We developed NeuronStitcher, a software suite for stitching non-overlapping neuron fragments reconstructed in serial 3D image sections. With its efficient algorithm and user-friendly interface, NeuronStitcher has been used successfully to reconstruct very large and complex human and mouse neurons.
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Key words
Neuron,Stitch,Neuron stitcher,Reconstruct morphology,Alignment,Vaa3D
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