Lowest ionisation and excitation energies of biologically important heterocyclic planar molecules

MOLECULAR PHYSICS(2016)

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Abstract
We calculate the lowest ionisation and excitation energies in a variety of biologically important molecules, i.e. pi-conjugated systems like DNA and RNA bases and isomers plus related heterocyclic molecules. For approximately half of these molecules, there are no experimental and theoretical/numerical data in the literature, as far as we know. These electronic transitions are mainly but not exclusively of pi and pi-pi* character, respectively. We perform symmetry-constrained density functional theory (DFT) geometry optimisation at the B3LYP/6-311++G** level of theory. At the DFT-obtained ground-state geometries, we calculate vertical ionisation energies with ionisation potential coupled cluster with singles and doubles (IP-EOMCCSD) and vertical excitation energies with the completely renormalised equation of motion coupled cluster with singles, doubles, and non-iterative triples (CR-EOMCCSD(T)) method. We also investigate whether a simple semi-empirical Huckel-type model approach with novel parametrisation could provide reasonable estimates of the lowest pi ionisation and pi-pi* excitation energies. Our coupled cluster (CC) results are in very good agreement with experimental data, while the Huckel-type model predictions generally follow the trends with some deviation. Finally, we investigate the effect of basis set in IP-EOMCCSD energies and we compare our CR-EOMCCSD(T) results with time-dependent DFT (TDDFT) ones.
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Key words
LCAO,CR-EOMCCSD(T),Huckel model,Nucleic acid bases,excitation energy,IP-EOMCCSD,TDDFT,ionisation energy
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