Protein Structure Initiative Material Repository (Psi-Mr): A Resource Of Structural Genomics Plasmids For The Biological Community

BIOPHYSICAL JOURNAL(2010)

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摘要
The Protein Structure Initiative Material Repository (PSI-MR; http://psimr.asu.edu) provides centralized storage and distribution for the growing collection of more than 80,000 protein expression plasmids created by PSI researchers. These plasmids are an invaluable resource that allows the research community to dissect the biological function of proteins whose structures have been identified by the PSI. The plasmid annotation, which includes the full length sequence, vector information, and associated publications, is stored in a freely available, searchable database called DNASU (http://dnasu.asu.edu). Each PSI plasmid is also linked to a variety of additional resources, including the PSI Structural Genomics Knowledgebase (PSI-SGKB: http://kb.psi-structuralgenomics.org), which facilitates cross-referencing of a particular plasmid to protein annotations and experimental data. Nearly 16,000 PSI plasmid samples are currently available and can be requested directly though the website. The PSI-MR has also developed a novel strategy to avoid the most common concern encountered when distributing plasmids, namely the complexity of material transfer agreement (MTA) processing and the resulting delays this causes. It is in this context that we developed and successfully implemented the Expedited Process MTA, in which we created a network of institutions that agree to the terms of transfer in advance of a material request, thus eliminating the delay researchers would typically encounter while their institution is processing the MTA. Our hope is that by creating a repository of expression-ready plasmids and expediting the process for receiving these plasmids, we will help accelerate the accessibility and pace of scientific discovery.
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关键词
protein structure,structural genomics
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