南方红豆杉内生细菌分离鉴定及系统发育分析
Biotechnology(2012)
Abstract
目的:了解南方红豆杉内生细菌类群及其系统发育关系;方法:对分离菌株进行形态学、生理生化和分子鉴定,并做系统发育分析.结果:从南方红豆杉茎、皮和叶中共分离到内生细菌52株.对12株内生细菌16S rDNA进行PCR扩增,扩增产物大小约为1 400bp,对11株内生细菌16S rDNA测序结果,用BLAST软件进行相似性比对,发现TB02株为Enterobacter属,相似性99%;9株为Bacillus属,相似性99%~ 100%:TB13株为Lysinibacillus,相似性97%.通过构建系统发育树发现这11株内生细菌明显聚为两大支.结论:11株内生细菌分别鉴定为肠杆菌、芽孢杆菌和Lysinibacillus,芽孢杆菌为南方红豆杉内生细菌优势菌属.芽孢杆菌和Lysinibacillus亲缘关系较近,二者和肠杆菌之间亲缘关系较远.
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Key words
isolation and identification,endophytic bacteria,phylogenetic analysis,Taxus chinensis var mairei
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