Regular expressions fusion using emergent computing

ISPACT'10: Proceedings of the 9th WSEAS international conference on Advances in e-activities, information security and privacy(2010)

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摘要
In this article is presented an approach for the comparison and establishment of patterns (motifs) from regular expressions that denote protein families, through the fusion of the sames. This task has a high computational cost, for this reason our approach uses a combinatorial optimization algorithm based on Ant Colonies to obtain the patterns that help the study and classification of families of protein chains. Particularly, we propose a system that can efficiently generate a pattern of the fusion of two regular expressions that describe protein chains, denoted in PROSITE language, in order to facilitate the analysis and classification of protein families from the structural point of view.
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关键词
protein chain,regular expression,denote protein family,protein family,Ant Colonies,PROSITE language,combinatorial optimization algorithm,high computational cost,structural point,emergent computing,regular expressions fusion
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