基本信息
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Bio
Professor Bafna is an expert in bioinformatics. He has published on many aspects of this emerging field, including genome rearrangements, multiple alignments, RNA structure, gene finding, DNA signals, mass spectrometric data analysis, and human population genetics. In genome rearrangement, he introduced (with his then-advisor and now UCSD colleague Pavel Pevzner) the breakpoint graph technique that is now commonly used when doing computational analysis of genome rearrangements. In computational proteomics, Bafna made key contributions to the problem of protein identification by devising a scoring function that incorporates ion fragmentation probability as well as instrument error, and an efficient algorithm to compute that score. He led a team at Celera that built a toolkit for identifying and quantitfying the Proteome using mass spectrometry.
Research Interests
Papers共 289 篇Author StatisticsCo-AuthorSimilar Experts
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Rishaan Kenkre,Owen Chapman,Jens Luebeck,Vineet Bafna,Robert Wechsler-Reya,Jill Mesirov,Lukas Chavez
Cancer Researchno. 6_Supplement (2024): 2271-2271
Jens Luebeck, Edwin Huang,Forrest Kim,Ted Liefeld,Bhargavi Dameracharla, Rohil Ahuja,Daniel Schreyer, Gino Prasad, Michał Adamaszek, Rishaan Kenkre, Tushar Agashe, Devika Torvi,
biorxiv(2024)
Albert S. Agustinus,Duaa Al-Rawi,Bhargavi Dameracharla,Ramya Raviram, Bailey S. Jones,Stephanie Stransky,Lorenzo Scipioni,Jens Luebeck,Melody Di Bona, Danguole Norkunaite,Robert M. Myers,Mercedes Duran,
Cancer Researchno. 6_Supplement (2024): 4293-4293
Chris Bailey,Oriol Pich,Kerstin Thol,Jens Luebeck, Georgia Stavrou,Thomas B. Watkins,Natasha E. Weiser,Wei-Ting Lu, Jeanette Kittel,Robert Bentham, Natasha Sharma,Roberto Salgado,
Cancer Researchno. 6_Supplement (2024): 3887-3887
crossref(2024)
Cancer Researchno. 7_Supplement (2023): 3130-3130
bioRxiv (Cold Spring Harbor Laboratory)no. 7 (2023)
Siavash Mirarab,Vineet Bafna
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