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10 representative publications
Incarnato D, Morandi E, Simon LM, Oliviero S. (2018) RNA Framework: an all-in-one toolkit for the analysis of RNA structures and post-transcriptional modifications. Nucleic Acids Res.
doi: 10.1093/nar/gky486
Neri F, Rapelli S, Krepelova A, Incarnato D, Parlato C, Basile G, Maldotti M, Anselmi
F, Oliviero S. (2017) Intragenic DNA methylation prevents spurious transcription initiation.
Nature 543: 72-77.
Incarnato D, Oliviero S. (2017) The RNA Epistructurome: Uncovering RNA Function by
Studying Structure and Post-Transcriptional Modifications. Trends Biotechnol. 35:318-333.
Incarnato D, Anselmi F, Morandi E, Neri F, Maldotti M, Rapelli S, Parlato C, Basile
G, Oliviero S. (2017) High-throughput single-base resolution mapping of RNA 2'-Omethylated residues. Nucleic Acids Res. 45: 1433-1441
Neri F, Incarnato D, Krepelova A, Oliviero S. (2016) Methylation-assisted bisulfite
sequencing to simultaneously map 5fC and 5caC on a genome-wide scale for DNA
demethylation analysis. Nature Protocols. 11: 1191-205.
Neri F, Incarnato D, Krepelova A, Rapelli S, Maldotti M, Anselmi F, Parlato C, Medana C, Dal Bello F. and S Oliviero (2015) Single-Base Resolution Analysis of 5-Formyl and 5-Carboxyl Cytosine Reveals Promoter DNA Methylation Dynamics. Cell Reports 10: 674–683
Incarnato D, Neri F, Anselmi F, Oliviero S. (2014) Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome. Genome Biology. 15: 491.
Neri F., Krepelova A., Incarnato D., Maldotti M., Parlato C., Galvagni F., Matarese F.,
Stunnenberg H.G., and S. Oliviero (2013) Dnmt3L antagonizes DNA methylation at bivalent promoters and favors DNA methylation at gene bodies in ESCs. Cell 155: 121-34.
Zippo A., Serafini R., Rocchigiani M., Pennacchini S., Krepelova A., and S. Oliviero (2009) Histone cross-talk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation. Cell 138: 1122-1136.
Zippo A., De Robertis A., Serafini R., and S. Oliviero. (2007) PIM1-dependent
phosphorylation of Histone H3 at Serine 10 is required for MYC-dependent transcriptional activation and oncogenic transformation. Nature Cell Biology 9: 932-44.
Incarnato D, Morandi E, Simon LM, Oliviero S. (2018) RNA Framework: an all-in-one toolkit for the analysis of RNA structures and post-transcriptional modifications. Nucleic Acids Res.
doi: 10.1093/nar/gky486
Neri F, Rapelli S, Krepelova A, Incarnato D, Parlato C, Basile G, Maldotti M, Anselmi
F, Oliviero S. (2017) Intragenic DNA methylation prevents spurious transcription initiation.
Nature 543: 72-77.
Incarnato D, Oliviero S. (2017) The RNA Epistructurome: Uncovering RNA Function by
Studying Structure and Post-Transcriptional Modifications. Trends Biotechnol. 35:318-333.
Incarnato D, Anselmi F, Morandi E, Neri F, Maldotti M, Rapelli S, Parlato C, Basile
G, Oliviero S. (2017) High-throughput single-base resolution mapping of RNA 2'-Omethylated residues. Nucleic Acids Res. 45: 1433-1441
Neri F, Incarnato D, Krepelova A, Oliviero S. (2016) Methylation-assisted bisulfite
sequencing to simultaneously map 5fC and 5caC on a genome-wide scale for DNA
demethylation analysis. Nature Protocols. 11: 1191-205.
Neri F, Incarnato D, Krepelova A, Rapelli S, Maldotti M, Anselmi F, Parlato C, Medana C, Dal Bello F. and S Oliviero (2015) Single-Base Resolution Analysis of 5-Formyl and 5-Carboxyl Cytosine Reveals Promoter DNA Methylation Dynamics. Cell Reports 10: 674–683
Incarnato D, Neri F, Anselmi F, Oliviero S. (2014) Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome. Genome Biology. 15: 491.
Neri F., Krepelova A., Incarnato D., Maldotti M., Parlato C., Galvagni F., Matarese F.,
Stunnenberg H.G., and S. Oliviero (2013) Dnmt3L antagonizes DNA methylation at bivalent promoters and favors DNA methylation at gene bodies in ESCs. Cell 155: 121-34.
Zippo A., Serafini R., Rocchigiani M., Pennacchini S., Krepelova A., and S. Oliviero (2009) Histone cross-talk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation. Cell 138: 1122-1136.
Zippo A., De Robertis A., Serafini R., and S. Oliviero. (2007) PIM1-dependent
phosphorylation of Histone H3 at Serine 10 is required for MYC-dependent transcriptional activation and oncogenic transformation. Nature Cell Biology 9: 932-44.
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Hassan Dastsooz,Francesca Anselmi,Andrea Lauria, Chiara Cicconetti,Valentina Proserpio, Elham Mohammadisoleimani,Zahra Firoozi,Yaser Mansoori,Hamed Haghi-Aminjan,Livia Caizzi,Salvatore Oliviero
Frontiers in cell and developmental biology (2024): 1295403-1295403
Cristina Olgasi,Alessia Cucci,Ivan Molineris, Simone Assanelli,Francesca Anselmi,Chiara Borsotti, Chiara Sgromo,Andrea Lauria,Simone Merlin,Gillian E Walker,Salvatore Oliviero,Antonia Follenzi
Haematologicano. 1 (2024)
Matilde Cescon,Giovanna Gambarotta, Sonia Calabrò, Chiara Cicconetti, Francesca Anselmi, Svenja Kankowski, Luisa Lang, Marijana Basic, Andre Bleich, Silvia Bolsega, Matthias Steglich,Salvatore Oliviero,
Gut microbesno. 1 (2024): 2363015-2363015
M. Watanabe, C. Levralevron,V. Proserpio, G. Piacenti,A. Lauria, S. Kaltenbach,A. Tamburrini, K. Natsuga,T. Hagai,S. Oliviero,G. Donati
Molecular Therapy - Nucleic Acids (2023): 47-48
Cristina Olgasi,Alessia Cucci,Ivan Molineris, Simone Assanelli,Francesca Anselmi,Chiara Borsotti, Chiara Sgromo,Andrea Lauria,Simone Merlin,Gillian Walker,Paola Capasso,Salvatore Oliviero,
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Nature communicationsno. 1 (2023): 6302-6302
NATURE COMMUNICATIONSno. 1 (2023)
Nature Communicationsno. 1 (2023): 1-22
NATURE COMMUNICATIONSno. 1 (2023)
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