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Ancestry and diversification are processes unique to biology that shape every aspect of living systems, from individual cells to whole ecosystems. Using genome sequencing and other technologies we can now investigate these processes in unprecedented detail, and use the insights gained to tackle global challenges such as biodiversity loss, food production, and emerging epidemics. I feel fortunate to be a biologist at such an exciting time in the subject's history.
Most of my research concerns the evolutionary and ecological dynamics of infectious disease. Many pathogens evolve so rapidly that their ecology and evolution are coupled, requiring new inter-disciplinary methods of inquiry. Understanding this joint behaviour, sometimes called phylodynamics, is fundamental to applied problems including outbreak surveillance, vaccine design, and the evolution of drug resistance. I contribute to the theoretical development of phylodynamics and its application to public health and other fields. I develop new computational methods for the evolutionary analysis of genetic sequence data. More generally I am interested in topics at the interface of ecology and evolution, including molecular ecology, ancient DNA, portable genomics, spatial ecology, and statistical genetics.
Most of my research concerns the evolutionary and ecological dynamics of infectious disease. Many pathogens evolve so rapidly that their ecology and evolution are coupled, requiring new inter-disciplinary methods of inquiry. Understanding this joint behaviour, sometimes called phylodynamics, is fundamental to applied problems including outbreak surveillance, vaccine design, and the evolution of drug resistance. I contribute to the theoretical development of phylodynamics and its application to public health and other fields. I develop new computational methods for the evolutionary analysis of genetic sequence data. More generally I am interested in topics at the interface of ecology and evolution, including molecular ecology, ancient DNA, portable genomics, spatial ecology, and statistical genetics.
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论文共 519 篇作者统计合作学者相似作者
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Bernardo Gutierrez,Joseph L.-H. Tsui,Giulia Pullano, Mattia Mazzoli,Karthik Gangavarapu,Rhys Inward,Sumali Bajaj,Rosario Evans Pena, Simon Busch Moreno,Marc A. Suchard,Oliver G. Pybus, Alejandra Dunner,
medrxiv(2024)
Qiqi Yang, Ben Wang,Phillipe Lemey,Lu Dong,Tong Mu, R. Alex Wiebe,Fengyi Guo,Nídia Sequeira Trovão,Sang Woo Park,Nicola Lewis,Joseph L.-H. Tsui,Sumali Bajaj,
Nature Communicationsno. 1 (2024): 1-13
Laura C. Lozano Calderón,Gustavo S. Cabanne,Andrea Marcos,Sabrina Galdo Novo,Carolina Torres,Andrés M. Perez,Oliver G. Pybus,Guido A. König
Archives of Virologyno. 5 (2024): 1-10
medRxiv (Cold Spring Harbor Laboratory) (2024)
MICROBIOLOGY RESOURCE ANNOUNCEMENTSno. 3 (2024): e0118623-e0118623
crossref(2023)
Marina Escalera-Zamudio,Sergei L. Kosakovsky Pond, Natalia Martínez de la Viña,Bernardo Gutiérrez,Rhys P. D. Inward,Julien Thézé,Lucy van Dorp, Hugo G. Castelán-Sánchez,Thomas A. Bowden,Oliver G. Pybus,Ruben J.G. Hulswit
bioRxiv the preprint server for biologyno. 6 (2023)
PLOS global public healthno. 2 (2023): e0001455-e0001455
arxiv(2023)
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biorxiv(2023)
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