基本信息
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职业迁徙
个人简介
Fungal evolution
Our projects focus on using genome and transcriptome sequencing to study the evolutionary history and changes in Fungi through time. One set of projects focuses on the zygomycetes (Mucoromycota and Zoopagomycota) and chytrid fungi (Chytridiomycota, Blastocladiomycota). One of these efforts was the zygomycete genealogy of life project. We are further working on a new project to study impact of fungi on structure and function of the microbiomes of herptiles.
I co-lead the 1000 Fungal genomes project to generate 1000(s) of fungal genomes from the kingdom and efforts to analyze the genome evolution of the lineages, resolve the phylogenetic relationships of these species using phylogenomic approaches. We are using these data to ask questions about the origins of novelty in cellular morphology including the emergence of multicellular characteristics in fungi. We are working to generate and resolve large scale phylogenies of fungi from whole genome analyses and incorporating low coverage genome data with reference genomics.
Current areas of interest are in systematics and resolution of this part of the fungal tree of life using whole genome sequencing and automated pipelines for phylogenomics. We are especially focused on the pin molds in the Mucoromycotina, insect associated Entomopthoromycotina, and the Kickxellomycotina.
In addition we are working on chytrid fungi evolution including the resolving the diverse phylogenetic relationships and on host-pathogen interactions in the amphibian disease causing Batrachochytrium fungi. We supported through a project with the Gordon and Betty Moore Foundation to develop the amphibian-chytrid symbiosis into a model system. See our page and twitter feed. Our work has also explored the phylogenetic relationships and metabolism of anaerobic gut fungi within the Neocallomastigomycota chytrid fungi as well.
研究兴趣
论文共 372 篇作者统计合作学者相似作者
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Claudia Coleine,Tania Kurbessoian, Giulia Calia, Manuel Delgado-Baquerizo,Alessandro Cestaro,Massimo Pindo,Federica Armanini,Francesco Asnicar,Daniela Isola,Nicola Segata,Claudio Donati,Jason E. Stajich,
Fungal Diversitypp.1-18, (2024)
Thuy M. Nguyen,Nuttapon Pombubpa,Marcel Huntemann,Alicia Clum,Brian Foster,Bryce Foster,Simon Roux,Krishnaveni Palaniappan,Neha Varghese,Supratim Mukherjee, T. B. K. Reddy,Chris Daum,
MICROBIOLOGY RESOURCE ANNOUNCEMENTSno. 3 (2024): e0098023-e0098023
Rebecca A. Clemons, Mark N. Yacoub, Evelyn Faust,L. Felipe Toledo,Thomas S. Jenkinson,Tamilie Carvalho,D. Rabern Simmons, Erik Kalinka,Lillian K. Fritz-Laylin,Timothy Y. James,Jason E. Stajich
Current Biologyno. 7 (2024): 1469-1478.e6
MICROBIOLOGY RESOURCE ANNOUNCEMENTSno. 2 (2024): e0091323-e0091323
SCIENCE OF THE TOTAL ENVIRONMENT (2024): 170290-170290
Isaac A Diaz, Talieh Ostovar,Jinfeng Chen, Sarah Saddoris,Robert J. Schmitz,Susan R. Wessler,Jason Stajich,Danelle K. Seymour
biorxiv(2024)
Kelsen Dantas Eulálio,Daniel R Kollath, Liline Maria Soares Martins,Antonio de Deus Filho, Maria do Amparo Salmito Cavalcanti, Lucas Machado Moreira,Bernardo Guerra Tenório,Lucas Gomes de Brito Alves, Danielle Yamauchi,Ligia Vizeu Barrozo, George R Thompson Iii,Mathieu Nacher,
Nature communicationsno. 1 (2024): 3190-3190
Lluvia Vargas-Gastelum,Alexander S. Romer, Marjan Ghotbi, Jason W. Dallas, N. Reed Alexander,Kylie C. Moe,Kerry L. McPhail,George F. Neuhaus, Leila Shadmani,Joseph W. Spatafora,Jason E. Stajich,Javier F. Tabima,
Bernardo Guerra Tenorio,Daniel R. Kollath, Lalitha Gade, Anastasia P. Litvintseva, Tom Chiller, Jeff S. Jenness,Jason E. Stajich,Daniel R. Matute,Andrew S. Hanzlicek,Bridget M. Barker,Marcus de Melo Teixeira
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