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Bio
1. Ji HK, Jiang H, Ma W, Johnson DS, Myers RM and Wong WH (2008) An integrated software system for analyzing ChIP-chip and ChIP-seq data. Nature Biotechnology. 26: 1293-1300. [Link] [Link to CisGenome]
2. Ji HK*, Li X, Wang QF, Ning Y (2013) Differential principal component analysis of ChIP-seq. Proc. Natl. Acad. Sci. USA. 110: 6789-6794. [Link] [Link to dPCA]
3. Ji HK and Wong WH (2005) TileMap: create chromosomal map of tiling array hybridizations. Bioinformatics, 21: 3629-3636. [Link] [Supporting Website: TileMap]
4. Wei YY, Tenzen T, Ji HK* (2015) Joint analysis of differential gene expression in multiple studies using correlation motifs. Biostatistics. 16:31-46. [Link] [arXiv Preprint] [Link to CorMotif]
5. Ji ZC, Ji HK* (2016) TSCAN: pseudo-time reconstruction and evaluation in single-cell RNA-seq analysis. Nucleic Acids Research. 44(13): e117 [Link] [Link to TSCAN]
6. Wu G§, Yustein JT§, McCall MN, Zilliox M, Irizarry RA, Zeller K, Dang CV, Ji HK* (2013) ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip data. Bioinformatics. 29: 1182-1189. [Link] [Link to ChIP-PED]
7. Huang CR, Schneider AM, Lu Y, Niranjan T, Shen P, Robinson MA, Steranka JP, Valle D, Civin CI, Wang T, Wheelan SJ, Ji HK, Boeke JD, Burns KH (2010) Mobile interspersed repeats are major structural variants in the human genome. Cell. 141: 1171-1182. [Link]
8. Vokes SA, Ji HK, Wong WH and McMahon AP (2008) A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog mediated patterning of the mammalian limb. Genes & Development. 22: 2651-2663. [Link]
Research Interests
Papers共 180 篇Author StatisticsCo-AuthorSimilar Experts
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JOURNAL OF INFECTIOUS DISEASES (2024)
Statistics in Biosciencespp.1-4, (2024)
crossref(2024)
Srushti Kittane, Erik Ladewig,Taibo Li, Jillian Love,Amaia Arruabarrena-Aristorena, Xinyu Guo, Mirna Sallaku,Liliana Garcia-Martinez,Ryan Blawski, Javier Carmona Sanz, Christopher Simpkins, Wanlu Chen,
Cancer Researchno. 6_Supplement (2024): 1245-1245
ONCOGENEno. 6 (2024): 395-405
Journal of Allergy and Clinical Immunology (2024)
Research squareno. 6 (2024): 395-405
Temesgen E. Andargie,Katerina Roznik,Neelam Redekar,Tom Hill,Weiqiang Zhou, Zainab Apalara,Hyesik Kong,Oren Gordon,Rohan Meda,Woojin Park,Trevor S. Johnston, Yi Wang,
Science immunologyno. 87 (2023): eadg1487-eadg1487
Genesno. 2 (2023)
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