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个人简介
Research Statement
Systems biology of microbial cultures and communities
- Pathway reconstruction and analysis of bacterial communities from *omics datasets with relevance to biogeochemical cycles, biofuels, and human health
- Development of techniques for analysis, comparison, and unification of transcriptomics and proteomics datasets
Biophysical chemistry software, methods and applications
- Author of in lucem Molecular Mechanics (ilmm, Beck, D.A.C., Alonso, D.O.V., & Daggett, V)
- Development of an XML schema for molecular mechanics parameter library: MMPL
- Methods and software development for in silico drug and protein design in high-performance computing (HPC) environments
- Dynameomics: mass annotation of protein dynamics and unfolding in water by high-throughput atomistic molecular dynamics simulations. All atom, explicit solvent native and thermal unfolding simulations for hundreds of target proteins whose folds represent about 80% of the known protein domains. For more information, see our website: http://www.dynameomics.org
eScience
- Workflow design and engineering for data-intensive analytics in biology and chemistry
- Data mining, management and sharing strategies for large biological datasets
Systems biology of microbial cultures and communities
- Pathway reconstruction and analysis of bacterial communities from *omics datasets with relevance to biogeochemical cycles, biofuels, and human health
- Development of techniques for analysis, comparison, and unification of transcriptomics and proteomics datasets
Biophysical chemistry software, methods and applications
- Author of in lucem Molecular Mechanics (ilmm, Beck, D.A.C., Alonso, D.O.V., & Daggett, V)
- Development of an XML schema for molecular mechanics parameter library: MMPL
- Methods and software development for in silico drug and protein design in high-performance computing (HPC) environments
- Dynameomics: mass annotation of protein dynamics and unfolding in water by high-throughput atomistic molecular dynamics simulations. All atom, explicit solvent native and thermal unfolding simulations for hundreds of target proteins whose folds represent about 80% of the known protein domains. For more information, see our website: http://www.dynameomics.org
eScience
- Workflow design and engineering for data-intensive analytics in biology and chemistry
- Data mining, management and sharing strategies for large biological datasets
研究兴趣
论文共 164 篇作者统计合作学者相似作者
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期刊级别
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JOURNAL OF MATERIALS CHEMISTRY Ano. 16 (2024): 9730-9746
biorxiv(2024)
Saravanan Ganesan,Rebecca M. Murray,Jesus Sotelo, Elliot O. Eton,Kouhei Takashima,Theo Botella, Kai Beattie, Alyssa C. Indart, Nada Chraiki,Carolyne Croizier,Franco Izzo,Catherine Potenski,
biorxiv(2024)
Batteriesno. 5 (2024): 159
EMBO journal (2024)
Justina Guirguis, Sonia Iosim, Derek Jones, Maryel Likhite, Fei Chen,Chimene Kesserwan,Tatyana Gindin,Philip J Kahn,David Beck,Vikash S Oza,Kirsty Hillier
Pediatric dermatologyno. 4 (2024): 707-713
JOURNAL OF INFECTIOUS DISEASESno. 6 (2024): 1740-1749
JID Innovationsno. 1 (2024): 100242
Andrew J. Connolly, Joseph L. Hellerstein, Naomi Alterman,David A. C. Beck,Rob Fatland, Edward D. Lazowska, Vani Mandava,Sarah Stone
Harvard Data Science Reviewno. 2 (2023)
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作者统计
#Papers: 157
#Citation: 6091
H-Index: 41
G-Index: 76
Sociability: 7
Diversity: 3
Activity: 60
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