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Bio
Chengpeng Bi received the MEng degree in computer science and the PhD degree in biology/entomology (major) and operations research (minor) from the Pennsylvania State University, University Park, in 2000 and 2002. He is the director of the Bioinformatics and Intelligent Computing Laboratory, Division of Clinical Pharmacology, Children's Mercy Hospitals and Clinics and an assistant professor of medicine and adjunct professor of computing and engineering at the University of Missouri, Kansas City. He started his bioinformatics career as a postdoctoral fellow at the University of California Davis Genome Center from June 2002 to August 2003. He is interested in using statistical modeling, machine learning, and computational intelligence methods to design novel algorithms and develop software packages for solving challenging problems in bioinformatics and computational genomics. He has published more than 20 peer-reviewed papers, in particular, on biological pattern recognition, de novo motif discovery algorithms for biomolecular (e.g., DNA and protein) sequence analysis, and statistical mechanical modeling on DNA structural transition or DNA melting. The paper on an evolution-inspired structured sequence pattern discovery algorithm was nominated for the Best Paper Award by the ACM GECCO 2006 Committee. His most recent paper describing a genetic-based EM motif discovery algorithm received the Best Overall Paper Achievement awarded by the 2007 IEEE Computational Intelligence on Bioinformatics and Computational Biology (CIBCB) Committee. He is a member of the IEEE and the IEEE Computer Society.
Research Interests
Papers共 52 篇Author StatisticsCo-AuthorSimilar Experts
By YearBy Citation主题筛选期刊级别筛选合作者筛选合作机构筛选
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Ayse G. Keskus, Asher Bryant, Tanveer Ahmad,Byunggil Yoo,Sergey Aganezov, Anton Goretsky,Ataberk Donmez, Lisa A. Lansdon,Isabel Rodriguez, Jimin Park, Yuelin Liu, Xiwen Cui, Joshua Gardner, Brandy McNulty, Samuel Sacco,Jyoti Shetty, Yongmei Zhao,Bao Tran,Giuseppe Narzisi,Adrienne Helland, Daniel E. Cook,Pi-Chuan Chang,Alexey Kolesnikov, Andrew Carroll, Erin K. Molloy,Chengpeng Bi,Adam Walter, Margaret Gibson,Irina Pushel,Erin Guest, Tomi Pastinen,Kishwar Shafin,Karen H. Miga,Salem Malikic, Chi-Ping Day,Nicolas Robine,Cenk Sahinalp,Michael Dean,Midhat S. Farooqi,Benedict Paten,Mikhail Kolmogorov
Nature Biotechnologypp.1-11, (2025)
Lisa A Lansdon,Byunggil Yoo,Ayse Keskus,Irina Pushel,Chengpeng Bi,Tanveer Ahmad,Asher Bryant,Adam Walter,Margaret Gibson, Mary Rindler,Weijie Li, Sultan M Habeebu,Linda D Cooley,John Herriges,Elena Repnikova, Lei Zhang,Keith J August,Terrie G Flatt,Alan S Gamis,Erin M Guest,J Allyson Hays,Maxine Hetherington,Karen Lewing,Tomi Pastinen,Mikhail Kolmogorov,Midhat S Farooqi
medRxiv the preprint server for health sciences (2024)
Jimin Park,Daniel E Cook,Pi-Chuan Chang,Alexey Kolesnikov, Lucas Brambrink, Juan Carlos Mier,Joshua Gardner,Brandy McNulty,Samuel Sacco,Ayse Keskus,Asher Bryant,Tanveer Ahmad,Jyoti Shetty,Yongmei Zhao,Bao Tran,Giuseppe Narzisi,Adrienne Helland,Byunggil Yoo,Irina Pushel,Lisa A Lansdon,Chengpeng Bi,Adam Walter,Margaret Gibson,Tomi Pastinen,Midhat S Farooqi,Nicolas Robine,Karen H Miga,Andrew Carroll,Mikhail Kolmogorov,Benedict Paten,Kishwar Shafin
bioRxiv the preprint server for biology (2024)
Egor Dolzhenko,Adam English,Harriet Dashnow,Guilherme De Sena Brandine,Tom Mokveld,William J. Rowell,Caitlin Karniski,Zev Kronenberg,Matt C. Danzi,Warren A. Cheung,Chengpeng Bi,Emily Farrow,Aaron Wenger, Khi Pin Chua,Verónica Martínez-Cerdeño,Trevor D. Bartley,Peng Jin,David L. Nelson,Stephan Zuchner,Tomi Pastinen,Aaron R. Quinlan,Fritz J. Sedlazeck,Michael A. Eberle
Cancer Researchno. 6_Supplement (2024): 1763-1763
Egor Dolzhenko,Adam English,Harriet Dashnow,Guilherme De Sena Brandine,Tom Mokveld,William J. Rowell,Caitlin Karniski,Zev Kronenberg,Matt C. Danzi,Warren Cheung,Chengpeng Bi,Emily Farrow,Aaron Wenger,Verónica Martínez-Cerdeño,Trevor D Bartley,Peng Jin,David Nelson,Stephan Zuchner,Tomi Pastinen,Aaron R. Quinlan,Fritz J. Sedlazeck,Michael A Eberle
crossref(2023)
Egor Dolzhenko,Adam English,Harriet Dashnow,Guilherme De Sena Brandine,Tom Mokveld,William J. Rowell,Caitlin Karniski,Zev Kronenberg,Matt C. Danzi,Warren Cheung,Chengpeng Bi,Emily Farrow,Aaron Wenger,Verónica Martínez-Cerdeño,Trevor D Bartley,Peng Jin,David Nelson,Stephan Zuchner,Tomi Pastinen,Aaron R. Quinlan,Fritz J. Sedlazeck,Michael A Eberle
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Warren A. Cheung,Adam F. Johnson,William J. Rowell,Emily Farrow,Richard Hall,Ana S. A. Cohen,John C. Means,Tricia N. Zion,Daniel M. Portik,Christopher T. Saunders,Boryana Koseva,Chengpeng Bi,Tina K. Truong,Carl Schwendinger-Schreck,Byunggil Yoo,Jeffrey J. Johnston,Margaret Gibson,Gilad Evrony,William B. Rizzo,Isabelle Thiffault,Scott T. Younger,Tom Curran,Aaron M. Wenger,Elin Grundberg,Tomi Pastinen
Genetics in Medicine Openno. 1 (2023): 100505-100505
CANCER RESEARCHno. 7 (2023)
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Author Statistics
#Papers: 52
#Citation: 806
H-Index: 17
G-Index: 27
Sociability: 5
Diversity: 3
Activity: 10
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