基本信息
views: 30
![](https://originalfileserver.aminer.cn/sys/aminer/icon/show-trajectory.png)
Bio
Main pointers
Center for Genomic Regulation https://www.crg.eu/cedric_notredame
Research work: https://tcoffee.org/
Nar Genomics and Bioinformatics: https://academic.oup.com/nargab
Google Scholar Profile: https://scholar.google.com/citations?hl=en&user=3KeXQ2cAAAAJ
Short Bio
I am a molecular biologist by training (Toulouse, FR). I did my Ph.D. at EMBL (Heidelberg, GE) and EMBL-EBI (Cambridge, UK) under the supervision of Des Higgins. In 2001, I became a CNRS fellow and since 2007 I have been a senior PI at the CRG (Barcelona, ES) where I manage a team of about 10 researchers. My most notable scientific achievements include:
Nextflow, a pipeline language that makes it possible to run complex analyses in a portable and reproducible way (www.nextflow.io, Nature Biotech 2017). In 2021, Nextflow was awarded the Swiss Institute of Bioinformatics innovation award. While in my lab, four of my students incorporated two highly successful companies around this new technology: Lifebits (Chatzou, Prieto) and Seqera Labs (Floden, DiTomasso). Altogether these two companies had already raised over 100 million dollars in 2022.
T-Coffee, a multiple sequence alignment algorithm (www.tcoffee.org, JMB 2000, Nature Biotech 2019) that has received over 8.000 citations and whose consistency-based algorithm now forms the basis of most multiple sequence aligners.
NAR Genomics and Bioinformatics, a sister title of Nucleic Acids Research that I launched in 2019, with the support of NAR and Oxford University Press. I act as a chief editor in this journal that specializes in publishing methods with a strong focus on reproducibility.
"Bioinformatics for Dummies", a title of the dummies series that I co-authored with Jean-Michel Claverie (2002, 2009). The book has been one of the best-selling titles of bioinformatics with over 40.0000 copies sold worldwide.
My scientific interests are very wide and include any domain where sequence comparison methods can contribute: sequence analysis algorithm, phylogeny reconstruction methods, rational use of structural information for sequence and evolutionary analysis, genomics and transcriptomics analysis, RNA analysis algorithms, methodological development for longitudinal data analysis and high-throughput computation.
I am a huge fan of informal inter-disciplinary adventures and even though I am growing wiser by the years, I still find it hard to resist crazy collaboration invitations by fellow scientists. In this domain, my most adventurous expedition has probably been the adaptation of bioinformatics methods for the analysis of social longitudinal data, in collaboration with Lausanne University Social Science department. I am not ruling out even wilder endeavors in the future - on the contrary...
Research Interests
Papers共 87 篇Author StatisticsCo-AuthorSimilar Experts
By YearBy Citation主题筛选期刊级别筛选合作者筛选合作机构筛选
时间
引用量
主题
期刊级别
合作者
合作机构
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Zenodo (CERN European Organization for Nuclear Research) (2022)
F1000Research (2020)
biorxiv(2020)
user-5da93e5d530c70bec9508e2b(2019)
Cited0Views0Bibtex
0
0
NAR GENOMICS AND BIOINFORMATICSno. 1 (2019): e1-e1
Load More
Author Statistics
Co-Author
Co-Institution
D-Core
- 合作者
- 学生
- 导师
Data Disclaimer
The page data are from open Internet sources, cooperative publishers and automatic analysis results through AI technology. We do not make any commitments and guarantees for the validity, accuracy, correctness, reliability, completeness and timeliness of the page data. If you have any questions, please contact us by email: report@aminer.cn